By Flan Garvey
A Masters’ thesis submitted to the college of industrial, Humanities and Social reviews within the Institute of expertise, Tralee, eire
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Our model, described below, is tentatively applied to molecular simulation analysis to examine the interaction between cardiolipin and cytochrome c. Prior to conducting in silico chemistry, we experimentally analyzed the interaction between cardiolipin and cytochrome c. , 1990). The spectral features of cytochrome c are well established with signal assignments for paramagnetically resolved resonances. Soussi et al. 5 ppm was a function of increasing amounts of cardiolipin in the presence of cytochrome c in phosphatidylcholine vesicles.
2000, Mitochondrial phospholipid hydroperoxide glutathione peroxidase inhibits the release of cytochrome c from mitochondria by suppressing the peroxidation of cardiolipin in hypoglycaemiainduced apoptosis. Biochem. , 1998, Caspases: the proteases of the apoptotic pathway. , 2000, Mitochondrial function in ischemeia and reperfusion of the ageing heart. Clin. Exp. Pharmacol. , 1997, A model for p53induced apoptosis. Nature, 389: 300-305 35 36 Yoshihiro Shidoji et al. Pushpa-Rekha, T. , Burdsall, A.
The propionate-side (lower part in Figure 2) of the heme c group is exposed to the solvent so that the underside of cytochrome c in Figure 2 makes an entrance to the belly of the protein. 0 (CambridgeSoft Co. MA). After 342 iterations, a stable conformation shown in Figure 3 was obtained by minimization of total steric energy, which included electrostatic energy as well as energy of bend, stretch, torsion, and van der Waals. As seen in the figure, 2 linoleic acids on 1 glycerol are maximally apart from each other and these 2 pairs of the acids face each other through 3 glycerol moieties in a rectangularly twisted state.